机构:[1]Guangzhou University of Chinese Medicine, Institute of Chinese Medicine Guangzhou, China.[2]The Second Affiliated Hospital of Guangzhou University of Chinese Medicine, WEN Ziyuan Pediatric Academic School Inheritance Studio,Guangzhou, China.广东省中医院[3]The Second Affiliated Hospital of Guangzhou University of Chinese Medicine, Department of Pediatrics Guangzhou, Guangdong Province, China.大德路总院珠海院区儿科儿科大德路总院儿科广东省中医院
Allergic Rhinitis (AR), an inflammatory affliction impacting the upper respiratory tract, has been registering a substantial surge in incidence across the globe.We embarked on examination of differentially expressed genes (DEGs) and the Weighted Gene Co-Expression Network Analysis (WGCNA). With this armory of genes identified, we engaged the tools of Gene Ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG). Our study continued with the establishment of a protein-protein interaction (PPI) network and the application of LASSO regression. Finally, we leveraged a docking model to elucidate potential drug-gene interactions involving these key genes.Through WGCNA and different express genes screening, PPI network was performed, identifying top 20 key genes, including CD44, CD69, CD274. LASSO regression identified three independent factors, STARD5, CST1, and CHAC1, that were significantly associated with AR. A predictive model was developed with an AUC value over 0.75. Also, 105 potential therapeutic agents were discovered, including Fluorouracil, Cyclophosphamide, Doxorubicin, and Hydrocortisone, offering promising therapeutic strategies for AR.By fusing DEGs with key genes derived from WGCNA, this study has illuminated a comprehensive network of gene interactions involved in the pathogenesis of AR, paving the way for future biomarker and therapeutic target discovery in AR.
基金:
The research presented in this article was generously supported by the "WEN Ziyuan Pediatric
Academic School Inheritance Studio" based at the Guangdong Provincial Hospital of Traditional
Chinese Medicine under the grant number E43613. We extend our gratitude for their unwavering
commitment to fostering academic pursuits and promoting the advancement of pediatric research
in the realm of traditional Chinese medicine
第一作者机构:[1]Guangzhou University of Chinese Medicine, Institute of Chinese Medicine Guangzhou, China.
通讯作者:
推荐引用方式(GB/T 7714):
Yuan Chile,Lin Xiaohong,Liao Ruosha.Decoding the Genetic Landscape of Allergic Rhinitis: A Comprehensive Network Analysis Revealing Key Genes and Potential Therapeutic Targets[J].JOURNAL OF ASTHMA.2024,1-21.doi:10.1080/02770903.2024.2306619.
APA:
Yuan Chile,Lin Xiaohong&Liao Ruosha.(2024).Decoding the Genetic Landscape of Allergic Rhinitis: A Comprehensive Network Analysis Revealing Key Genes and Potential Therapeutic Targets.JOURNAL OF ASTHMA,,
MLA:
Yuan Chile,et al."Decoding the Genetic Landscape of Allergic Rhinitis: A Comprehensive Network Analysis Revealing Key Genes and Potential Therapeutic Targets".JOURNAL OF ASTHMA .(2024):1-21