机构:[1]Department of Gastroenterology, The First Affiliated Hospital of Guangzhou University of Chinese Medicine, No. 12 Airport Road, Baiyun District, Guangzhou 510407, China.深圳市中医院深圳医学信息中心[2]Department of Laboratory Medicine, Guangdong Second Provincial General Hospital, Guangzhou 510317, China.[3]Lingnan Medical Research Center, Guangzhou University of Chinese Medicine, Guangzhou 510407, China.深圳市中医院深圳医学信息中心
Prognosis of patients with lung cancer remains extremely poor; thus, we sought to unearth novel competing endogenous RNA (ceRNA) networks associated with the prognosis of lung adenocarcinoma (LUAD). Aberrant mRNAs were identified from the intersection of three Gene Expression Omnibus (GEO) datasets. A protein-protein interaction (PPI) network was constructed, and miRNAs and long noncoding RNAs (lncRNAs) upstream of mRNAs were predicted. In the present study, 402 upregulated and 638 downregulated genes in lung cancer tissues were identified. Functional analysis showed significant enrichment of cancer pathways. In these top hub genes, 10 upregulated and 7 downregulated genes had substantial prognostic values in LUAD. Thirty-seven miRNAs were predicted to target 17 key genes, and only five miRNAs exhibited prognostic correlation. Through stepwise reverse prediction and validation from miRNA to lncRNA, four key lncRNAs were identified using expression and survival analysis. Ultimately, the co-expression analysis identified LINC00665-miR-let-7b-CCNA2 as the key ceRNA network associated with the prognosis of LUAD. We successfully constructed a novel ceRNA network wherein each component was significantly associated with the prognosis of LUAD. Hence, we propose that this network may provide key biomarkers or potential therapeutic targets for LUAD prognosis.
基金:
This research was funded by the National Natural Science Foundation of China (No. 81700512) and Natural
Science Foundation of Guangdong Province of China (No. 2016A030310252).
语种:
外文
PubmedID:
中科院(CAS)分区:
出版当年[2020]版:
大类|3 区综合性期刊
小类|3 区综合性期刊
最新[2025]版:
大类|3 区综合性期刊
小类|3 区综合性期刊
第一作者:
第一作者机构:[1]Department of Gastroenterology, The First Affiliated Hospital of Guangzhou University of Chinese Medicine, No. 12 Airport Road, Baiyun District, Guangzhou 510407, China.
共同第一作者:
通讯作者:
通讯机构:[1]Department of Gastroenterology, The First Affiliated Hospital of Guangzhou University of Chinese Medicine, No. 12 Airport Road, Baiyun District, Guangzhou 510407, China.[3]Lingnan Medical Research Center, Guangzhou University of Chinese Medicine, Guangzhou 510407, China.
推荐引用方式(GB/T 7714):
Yusheng Huang,Limei Zhong,Kechao Nie,et al.Identification of LINC00665-miR-let-7b-CCNA2 competing endogenous RNA network associated with prognosis of lung adenocarcinoma.[J].Scientific reports.2021,11(1):4434.doi:10.1038/s41598-020-80662-x.
APA:
Yusheng Huang,Limei Zhong,Kechao Nie,Lijuan Li,Shaohua Song...&Yufeng Liu.(2021).Identification of LINC00665-miR-let-7b-CCNA2 competing endogenous RNA network associated with prognosis of lung adenocarcinoma..Scientific reports,11,(1)
MLA:
Yusheng Huang,et al."Identification of LINC00665-miR-let-7b-CCNA2 competing endogenous RNA network associated with prognosis of lung adenocarcinoma.".Scientific reports 11..1(2021):4434