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Dissection of pyroptosis-related prognostic signature and CASP6-mediated regulation in pancreatic adenocarcinoma: new sights to clinical decision-making

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机构: [1]Department of Oncology, Fuyang Hospital of Anhui Medical University, Fuyang 236000, Anhui, China [2]Hepatopancreatobiliary Center, The Second Afliated Hospital of Nanjing Medical University, 121 Jiangjiayuan, Nanjing 210003, Jiangsu, China [3]The Second Clinical College of Guangzhou Medical University, Guangzhou 510030, Guangdong, China [4]Department of Anesthesia, Shaoxing People’s Hospital, Shaoxing 312000, Zhejiang, China [5]Department of General Surgery, Fuyang Hospital of Anhui Medical University, Fuyang 236000, Anhui, China [6]The First Clinical Medicine College of Guangdong, Medical University, Zhanjiang 524000, Guangdong, China [7]School of Public Health, Guangzhou Medical University, Guangzhou 511400, Guangdong, China [8]Hunan University of Chinese Medicine, Changsha 410000, Hunan, China [9]School of Basic Medical Sciences, Xinxiang Medical University, Xinxiang 453003, Henan, China [10]Institute of Medical and Health Science, Hebei Medical University, Shijiazhuang 050017, Hebei, China [11]Department of Oncology, The First Afliated Hospital of Anhui Medical University, No.81, Meishan Road, Hefei 230000, Anhui, China
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关键词: Pyroptosis  Caspase 6  Pancreatic adenocarcinoma  Prognosis  Nomogram  Competing endogenous RNA

摘要:
Recent studies have indicated that pyroptosis may participate in the regulation of tumorigenesis and immune microenvironment. However, the role of pyroptosis-related genes (PRGs) in pancreatic adenocarcinoma (PAAD) remains unclear. Through multiple bioinformatics analysis, we constructed a prognostic gene model and competing endogenous RNA network. The correlation between PRGs and prognosis, immune infiltration, immune checkpoints, and tumor mutational burden was analyzed by Kaplan-Meier curve, univariate Cox, multivariate regression, and Spearman's analysis in PAAD patients. The qRT-PCR, Western blotting, CCK-8, Wound healing, and Transwell assay were applied to examine the role of CASP6 in PANC-1 cell. Thirty-one PRGs were upregulated in PAAD. Functional enrichment analysis revealed that the PRGs were mainly involved in pyroptosis, NOD-like receptor signaling pathway, and response to bacteria. We established a novel 4-gene signature related to PRGs for evaluating the prognosis of PAAD patients. Patients with PAAD in the low-risk group had a better prognosis than those in the high-risk group. The nomogram suggested that the 1-, 3-, and 5-years survival probability exhibited robust predictive performance. Significant correlation was observed between prognostic PRGs and immune infiltration, immune checkpoints, and tumor mutational burden. We first identified the potential competing endogenous RNA regulatory axis in PAAD: lncRNA PVT1/hsa-miR-16-5p/CASP6/CASP8. Moreover, knockdown of CASP6 dramatically inhibited the proliferation, migration, and invasion ability of PANC-1 cell in vitro. In conclusion, CASP6 could be a potential biomarker, promoting the occurrence and progression in PAAD. The lncRNA PVT1/hsa-miR-16-5p/CASP6/CASP8 regulatory axis plays an vital role in regulating the anti-tumor immune responses for PAAD.© 2023. The Author(s).

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出版当年[2022]版:
大类 | 2 区 生物学
小类 | 2 区 生化与分子生物学 3 区 细胞生物学
最新[2025]版:
大类 | 2 区 生物学
小类 | 3 区 生化与分子生物学 3 区 细胞生物学
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第一作者机构: [1]Department of Oncology, Fuyang Hospital of Anhui Medical University, Fuyang 236000, Anhui, China
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通讯机构: [1]Department of Oncology, Fuyang Hospital of Anhui Medical University, Fuyang 236000, Anhui, China [11]Department of Oncology, The First Afliated Hospital of Anhui Medical University, No.81, Meishan Road, Hefei 230000, Anhui, China
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