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Development of a multiplex two-gene real-time PCR assay for accurate detection of Klebsiella pneumoniae.

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机构: [a]Department of Clinical Laboratory , Shenzhen Shajing Hospital affiliated to Guangzhou Medical University , Shenzhen , China. [b]Dongguan Research Center, Traditional Chinese Medicine and New Drug Research Institute, Guangdong Medical University , Dongguan , China. [c]Department of Clinical Laboratory , The Second People's Hospital of Futian District , Shenzhen , China.
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关键词: Klebsiella pneumoniae PCR respiratory infection molecular diagnostics

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Background: Klebsiella pneumoniae is an opportunistic pathogen, causing an urgent threat to public health because of resistance to the carbapenems. A rapid and accurate molecular method for the detection of K. pneumoniae is required for guiding therapeutic treatment. Therefore, we aimed to develop a multiplex real-time PCR assay for sensitive detection of K. pneumoniae. Methods: Primers were designed according to the sequences of rcsA and 23S rRNA. Multiplex real-time PCR assay was developed after primers screening and optimization of reaction conditions. The method was clinically validated in 2754 sputum specimens tested by culture-based method were retested by the PCR assay. Results: Detection limit of the PCR assay was 2 cfu/reaction. Its sensitivity was 98.9% (94/95) on a panel of 95 K. pneumoniae isolates, and its specificity was 97.9% (93/95) on a panel of 95 negative control isolates. From the 2754 sputum specimens including 355 K. pneumoniae culture-positive specimens and 2399 K. pneumoniae culture-negative specimens, 349 of the 355 positive specimens were K. pneumoniae positive, and 104 of 2399 negative specimens were K. pneumoniae positive with the PCR assay. Of the 104 positive specimens, 75 specimens were confirmed by gene sequencing. The overall results demonstrated that the diagnostic sensitivity and diagnostic specificity of our assay were 98.6% (424/430) and 98.8% (2295/2324), respectively. Conclusion: We report a high sensitive and specific multiplex PCR assay for rapid and accurate diagnosis of K. pneumoniae.

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出版当年[2018]版:
大类 | 4 区 医学
小类 | 4 区 医学实验技术
最新[2025]版:
大类 | 4 区 医学
小类 | 3 区 医学实验技术
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出版当年[2017]版:
Q3 MEDICAL LABORATORY TECHNOLOGY
最新[2023]版:
Q2 MEDICAL LABORATORY TECHNOLOGY

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第一作者机构: [a]Department of Clinical Laboratory , Shenzhen Shajing Hospital affiliated to Guangzhou Medical University , Shenzhen , China.
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