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Ferroptosis Patterns Correlate with Immune Microenvironment Characterization in Gastric Cancer.

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机构: [1]Department of Gastroenterology, The FirstAffiliated Hospital of Guangzhou Universityof Chinese Medicine, Guangzhou,Guangdong, People’s Republic of China [2]First Clinical Medical College, GuangzhouUniversity of Chinese Medicine, Guangzhou,Guangdong, People’s Republic of China [3]Zhaoqing Hospital of Chinese MedicineAffiliated to Southern Medical University,Zhaoqing, Guangdong, People’s Republic ofChina [4]Baiyun Hospital of the First AffiliatedHospital of Guangzhou University ofChinese Medicine, Guangzhou, Guangdong,People’s Republic of China [5]GuangzhouUniversity of Chinese Medicine, Guangzhou,Guangdong, People’s Republic of China [6]Department of Gastroenterology, HainanProvincial Hospital of Traditional ChineseMedicine, Haikou, Hainan, People’s Republicof China
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关键词: ferroptosis gastric cancer immune cell infiltration tumor microenvironment immunotherapy

摘要:
We aimed to build a ferroptosis-based classifier to characterize the molecular features of gastric cancers (GC) and investigate the relationship between different ferroptosis patterns and GC tumor microenvironment (TME).Based on the genomic and clinical information from TCGA portal and GEO database, non-negative matrix factorization (NMF) was used to identify ferroptosis subtypes in GC patients. In order to estimate the ferroptosis levels, we established ferroptosis subtype score (FSS) to quantify ferroptosis patterns and ferroptosis potential index (FPI) by principal component analysis (PCA). The correlations of different ferroptosis patterns with TME cell-infiltrating characteristics (including immune cell infiltration, immune checkpoints expression levels, tumor mutational burden (TMB) and immunotherapy response) were systematically analyzed.Two ferroptosis subtypes, C1 (with lower FSS) and C2 (with higher FSS), were determined. C2 displayed a significantly lower FPI than C1. Besides, C2 was associated with diffuse subtype while C1 with intestinal subtype. As for TME characteristics, C2 was in accordance with the immune-excluded phenotype as it showed more active immune and stromal activities but lower TMB, less probability of immunotherapy response and poorer prognosis. C1 was linked to immune-inflamed phenotype as it had lower stromal activities but increased neoantigen load, enhanced response to immunotherapy and relatively better prognosis.The systematic assessment of ferroptosis patterns and ferroptosis levels presented in our study implied that ferroptosis serves as an important factor in the formation of TME, which may expand the understanding of TME and provide a novel perspective for the development of targeted immunotherapeutic strategies for GC patients.© 2021 Jiang et al.

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出版当年[2020]版:
大类 | 4 区 医学
小类 | 3 区 医学:内科
最新[2025]版:
大类 | 4 区 医学
小类 | 3 区 医学:内科
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第一作者机构: [1]Department of Gastroenterology, The FirstAffiliated Hospital of Guangzhou Universityof Chinese Medicine, Guangzhou,Guangdong, People’s Republic of China [2]First Clinical Medical College, GuangzhouUniversity of Chinese Medicine, Guangzhou,Guangdong, People’s Republic of China
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