机构:[1]School of Chinese Medicine, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong 999077, China[2]The First Clinical School, Guangzhou University of Chinese Medicine, Guangzhou 510405, China深圳市中医院深圳医学信息中心[3]The Second Clinical School, Guangzhou University of Chinese Medicine, Guangzhou 510405, China广东省中医院深圳市中医院深圳医学信息中心
Hepatocellular carcinoma (HCC) remains a global medical problem. Programmed cell death protein 1 (PD-1) is a powerful weapon against many cancers, but it is not sensitive to some patients with HCC. We obtained datasets from the Gene Expression Omnibus (GEO) database on HCC patients and PD-1 immunotherapy to select seven intersecting DEGs. Through Lasso regression, two intersecting genes were acquired as predictors of HCC and PD-1 treatment prognosis, including HAMP and FOS. Logistic regression was performed to build a prediction model. HAMP had a better ability to diagnose HCC and predict PD1 treatment sensitivity. Further, we adapted the support vector machine (SVM) technique using HAMP to predict triple-classified outcomes after PD1 treatment in HCC patients, which had an excellent classification ability. We also performed external validation using TCGA data, which showed that HAMP was elevated in the early stage of HCC. HAMP was positively correlated with the infiltration of 18 major immune cells and the expression of 2 important immune checkpoints, PDCD1 and CTLA4. We discovered a biomarker that can be used for the early diagnosis, prognosis and PD1 immunotherapy efficacy prediction of HCC for the first time and developed a diagnostic model, prognostic model and prediction model of PD1 treatment sensitivity and treatment outcome for HCC patients accordingly.
基金:
Hong Kong Health and Medical Research Fund [18192141]; RGC General Research Fund [17121419, 17119621]; Hong Kong Chinese Medicine Development Fund [19SB2/002A]; Wong's Donation [200006276]; Gaia Family Trust of New Zealand [200007008]
第一作者机构:[1]School of Chinese Medicine, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong 999077, China
推荐引用方式(GB/T 7714):
Chen Guoming,Zhang Cheng,Li Danyun,et al.HAMP as a Potential Diagnostic, PD-(L)1 Immunotherapy Sensitivity and Prognostic Biomarker in Hepatocellular Carcinoma[J].BIOMOLECULES.2023,13(2):doi:10.3390/biom13020360.
APA:
Chen, Guoming,Zhang, Cheng,Li, Danyun,Luo, Dongqiang,Liao, Hui...&Feng, Yibin.(2023).HAMP as a Potential Diagnostic, PD-(L)1 Immunotherapy Sensitivity and Prognostic Biomarker in Hepatocellular Carcinoma.BIOMOLECULES,13,(2)
MLA:
Chen, Guoming,et al."HAMP as a Potential Diagnostic, PD-(L)1 Immunotherapy Sensitivity and Prognostic Biomarker in Hepatocellular Carcinoma".BIOMOLECULES 13..2(2023)